Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001726.1 Hibiscus syriacus cultivar Beakdansim tig00003490_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55388

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11676--11710
18
1.9
18
94
0
61
74
5
0
20
1.02
12495--12531
2
19.0
2
94
5
67
48
0
0
51
1.00
12759--12792
15
2.3
15
89
0
50
23
2
8
64
1.36
17031--17066
2
17.5
2
94
5
63
50
2
0
47
1.15
17620--17652
2
16.5
2
93
0
57
48
0
3
48
1.17
17696--17745
26
1.9
26
95
0
91
40
16
14
30
1.87
18629--18682
27
2.0
28
85
3
74
25
11
24
38
1.88
33977--34107
24
5.5
24
82
3
129
21
10
16
51
1.73
33975--34109
72
1.9
72
82
3
173
21
11
15
51
1.74
38183--38220
17
2.2
17
90
0
58
28
2
2
65
1.19
38227--38283
26
2.1
25
81
15
69
36
7
0
56
1.27
41500--41538
2
19.5
2
100
0
78
51
0
0
48
1.00
45051--45088
17
2.3
17
86
4
51
57
0
2
39
1.12
45048--45088
16
2.5
16
84
4
55
56
0
2
41
1.13
54022--54157
58
2.3
60
86
5
179
34
11
13
39
1.82

Tables:   1

The End!