Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001729.1 Hibiscus syriacus cultivar Beakdansim tig00003494_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62664

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5318--5372
20
2.6
21
80
13
60
49
3
0
47
1.19
5510--5553
13
3.2
13
84
9
61
59
0
0
40
0.98
8906--8957
25
2.1
26
82
13
74
38
9
19
32
1.84
9694--9726
14
2.3
15
89
5
50
36
3
0
60
1.12
15532--15578
6
8.0
6
81
13
53
76
0
23
0
0.78
15534--15586
10
5.9
9
82
13
65
75
0
24
0
0.80
15532--15586
16
3.2
16
78
14
65
76
0
23
0
0.79
16098--16263
43
3.8
42
77
7
138
27
16
19
35
1.94
53722--53767
23
2.0
23
95
0
83
21
6
8
63
1.46
59877--59920
21
2.1
21
95
0
79
20
25
15
38
1.92
59884--59934
21
2.4
21
83
3
57
25
23
15
35
1.94
60089--60136
23
2.1
23
88
3
71
22
35
14
27
1.93
61589--61650
20
3.1
20
90
0
106
33
25
20
19
1.96
61964--61999
18
2.0
18
94
0
63
16
2
25
55
1.55

Tables:   1

The End!