Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000173.1 Hibiscus syriacus cultivar Beakdansim tig00000304_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46223

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5865--5899
12
2.9
12
91
0
52
31
5
25
37
1.80
6044--6076
15
2.2
15
100
0
66
15
18
33
33
1.92
18818--18842
12
2.1
12
100
0
50
20
16
24
40
1.91
23423--23447
12
2.1
12
100
0
50
20
16
24
40
1.91
29751--29806
27
2.0
28
82
3
69
44
3
3
48
1.37
29929--30010
22
3.6
22
79
11
69
47
2
1
48
1.22
31387--31415
13
2.2
13
100
0
58
17
44
24
13
1.85
33444--33491
21
2.3
21
96
0
87
27
16
31
25
1.97
38542--38581
13
3.1
13
85
0
62
15
42
22
20
1.88
41024--41068
3
15.0
3
100
0
90
66
0
0
33
0.92
43384--43423
20
2.0
20
85
9
55
60
0
12
27
1.33

Tables:   1

The End!