Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001732.1 Hibiscus syriacus cultivar Beakdansim tig00003497_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81752

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7800--7955
64
2.4
64
86
7
217
29
23
19
28
1.98
13737--13804
23
3.0
23
68
22
63
27
22
22
27
1.99
17634--17664
7
4.4
7
95
0
53
51
19
29
0
1.47
19647--19701
24
2.2
24
83
6
65
32
1
1
63
1.15
19875--19959
28
3.1
27
86
6
118
42
20
9
28
1.83
19875--19943
26
2.6
26
90
4
102
39
18
10
31
1.84
19875--19959
26
3.1
26
85
10
100
42
20
9
28
1.83
20084--20116
16
2.0
17
88
5
50
42
9
3
45
1.51
20433--20556
60
2.1
60
87
0
176
29
8
21
39
1.84
22620--22702
35
2.4
35
80
11
84
48
0
1
50
1.08
22689--22723
8
4.4
8
85
0
52
60
0
0
40
0.97
22637--22710
36
2.1
36
82
10
89
52
0
1
45
1.09
22817--22931
21
5.4
21
71
21
71
54
0
0
43
1.12
22849--22903
17
3.2
17
84
7
67
56
0
0
43
0.99
22828--22931
42
2.5
42
84
10
124
55
0
0
42
1.12
29975--30016
21
2.0
21
100
0
84
33
23
9
33
1.87
36925--36973
23
2.1
24
84
3
64
51
2
0
46
1.12
37879--37938
6
10.0
6
75
13
61
80
3
1
15
0.93
37879--37938
23
2.5
25
79
15
81
80
3
1
15
0.93
37879--38020
48
2.9
46
74
14
126
74
4
4
16
1.15
38040--38066
3
9.0
3
100
0
54
66
0
0
33
0.92
38122--38152
2
15.5
2
100
0
62
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38507--38545
20
2.0
20
84
0
51
12
41
30
15
1.85
39181--39223
22
2.0
22
85
0
59
9
16
39
34
1.80
39387--39432
2
25.5
2
79
20
57
52
0
0
47
1.00
39387--39432
7
6.4
7
92
5
65
52
0
0
47
1.00
43174--43238
29
2.2
30
81
13
73
23
10
0
66
1.23
58360--58467
46
2.4
46
81
13
134
33
20
18
27
1.96
58405--58529
64
1.9
65
88
4
191
28
23
20
27
1.99
59608--59656
21
2.3
21
86
10
64
71
8
4
16
1.26
65963--66006
5
8.4
5
80
9
52
70
4
2
22
1.17
65963--66006
21
2.1
21
87
8
63
70
4
2
22
1.17
75770--75889
42
2.9
42
81
3
145
31
23
20
24
1.98
75439--76172
261
2.8
258
84
4
921
31
19
18
29
1.96
76024--76067
19
2.2
19
84
8
52
25
18
25
31
1.97
76154--76266
57
2.0
58
84
5
149
40
16
11
30
1.84
76154--76280
57
2.2
58
81
6
143
40
16
13
29
1.87
77165--77507
173
2.0
173
92
1
571
29
21
16
32
1.96
78629--78689
21
2.8
22
87
5
79
0
22
0
77
0.78
78651--78705
21
2.6
21
82
8
58
5
20
0
74
1.01

Tables:   1

The End!