Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001734.1 Hibiscus syriacus cultivar Beakdansim tig00003502_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40285

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3896--3941
23
2.0
23
95
0
83
21
6
8
63
1.46
10095--10138
21
2.1
21
95
0
79
20
25
15
38
1.92
10102--10152
21
2.4
21
83
3
57
25
23
15
35
1.94
10311--10355
22
2.0
22
91
0
72
22
37
13
26
1.91
11837--11898
20
3.1
20
90
0
106
33
25
20
19
1.96
12217--12252
18
2.0
18
94
0
63
16
2
25
55
1.55
14510--14563
24
2.2
24
90
0
81
44
16
12
25
1.84
15457--15523
19
3.5
19
75
18
59
32
14
14
37
1.88
15574--15647
20
3.7
20
90
0
112
31
8
31
29
1.86
15859--15898
21
1.9
21
85
10
55
30
0
22
47
1.52
18587--18642
12
4.7
12
90
0
76
16
12
17
53
1.73
18786--18858
32
2.3
32
86
6
96
13
21
30
34
1.92
22807--22849
19
2.3
18
84
15
52
51
0
2
46
1.13
25073--25474
201
2.0
197
90
6
632
57
4
7
30
1.48
26742--27431
105
6.6
105
99
0
1344
22
17
26
33
1.96
28211--28251
12
3.4
12
93
0
73
0
12
0
87
0.53
28219--28252
14
2.5
14
95
4
61
0
8
0
91
0.43
38793--38862
36
1.9
37
82
8
90
72
1
4
21
1.09
38984--39359
185
2.0
186
85
11
504
56
5
7
30
1.50

Tables:   1

The End!