Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001747.1 Hibiscus syriacus cultivar Beakdansim tig00003536_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54565

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3668--3737
32
2.2
32
92
2
115
15
20
17
47
1.83
4172--4212
19
2.1
19
86
4
55
19
41
24
14
1.89
12022--12065
14
2.9
14
86
10
52
20
50
22
6
1.72
12036--12090
17
3.2
17
94
0
92
20
43
23
12
1.86
16135--16178
14
2.9
14
86
10
52
20
50
22
6
1.72
16149--16203
17
3.2
17
94
0
92
20
43
23
12
1.86
18898--18944
20
2.4
19
76
13
51
48
2
8
40
1.45
18955--18980
10
2.6
10
100
0
52
80
0
0
19
0.71
34973--35064
30
3.0
29
83
12
112
26
40
1
32
1.63
34973--35064
33
2.9
32
87
7
109
26
40
1
32
1.63
40504--40585
15
5.4
16
72
22
79
20
9
0
69
1.16
40504--40585
30
2.7
30
100
0
164
20
9
0
69
1.16
47838--47874
19
1.9
19
88
0
56
32
27
16
24
1.96
48232--48340
19
5.4
19
80
13
110
31
28
5
34
1.80
48342--48402
21
3.0
21
82
2
70
22
18
26
32
1.97
48773--48797
3
8.3
3
100
0
50
0
32
0
68
0.90

Tables:   1

The End!