Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001748.1 Hibiscus syriacus cultivar Beakdansim tig00003538_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70692

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2703--2754
7
8.0
7
76
20
51
55
0
0
44
0.99
2703--2754
17
3.5
15
80
14
63
55
0
0
44
0.99
2715--2756
17
2.3
18
92
8
68
54
0
0
45
0.99
2715--2756
6
7.0
6
78
10
50
54
0
0
45
0.99
3111--3142
14
2.3
14
94
0
55
37
9
0
53
1.34
3792--4106
159
2.0
152
85
7
413
32
17
15
34
1.91
10542--10569
2
14.0
2
100
0
56
50
0
0
50
1.00
11270--11396
46
2.8
46
91
3
213
37
7
22
33
1.81
13676--13716
13
3.2
13
89
6
57
82
0
17
0
0.66
13676--13717
21
2.0
21
90
9
68
83
0
16
0
0.65
17548--17674
46
2.8
46
90
1
202
38
7
22
32
1.81
19333--19459
46
2.8
46
91
3
213
37
7
22
33
1.81
21770--21815
17
2.7
17
80
6
58
76
0
8
15
1.02
21790--21839
16
3.1
16
80
8
57
78
0
16
6
0.95
25743--25869
46
2.8
46
90
1
202
38
7
22
32
1.81
29481--29625
54
2.7
54
89
0
200
32
17
18
31
1.95
36654--36803
54
2.8
54
83
2
185
35
16
17
31
1.92
53424--53498
11
7.6
10
70
18
59
41
6
4
48
1.48
53415--53509
29
3.3
29
95
0
154
42
5
6
46
1.51
56378--56421
15
2.9
15
83
12
63
38
6
18
36
1.77
63156--63200
20
2.2
21
80
11
58
11
6
35
46
1.66
63438--63504
35
1.9
35
87
0
98
19
17
14
47
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66235--66274
20
2.0
20
100
0
80
35
25
10
30
1.88

Tables:   1

The End!