Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001751.1 Hibiscus syriacus cultivar Beakdansim tig00003542_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64530

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7964--8007
21
2.1
21
86
0
61
27
15
18
38
1.91
13396--13434
16
2.6
15
84
11
53
66
7
7
17
1.40
13537--13584
24
2.1
22
81
14
53
47
18
4
29
1.67
17934--18002
22
3.1
22
89
0
102
24
18
18
37
1.94
23752--23810
27
2.2
27
100
0
118
8
23
13
54
1.66
26131--26225
23
4.1
23
76
16
90
49
14
7
28
1.70
26147--26225
22
3.5
22
78
13
88
50
13
7
27
1.69
31981--32039
27
2.2
27
100
0
118
8
23
13
54
1.66
34356--34450
23
4.1
23
76
16
90
49
14
7
28
1.70
34372--34450
22
3.5
22
78
13
88
50
13
7
27
1.69
44439--44489
3
16.0
3
80
11
57
37
1
1
58
1.20
44531--44573
22
1.9
23
85
4
61
51
39
0
9
1.34
45177--45270
30
3.2
29
75
14
93
20
11
8
59
1.58
47345--47373
14
2.0
15
93
6
51
17
13
13
55
1.70
48564--48588
10
2.5
10
100
0
50
84
8
8
0
0.79
48562--48623
22
2.8
20
79
13
61
80
6
11
1
0.96
49631--49703
32
2.3
32
85
4
103
30
10
24
34
1.90
49647--49752
32
3.3
32
80
7
99
29
13
20
36
1.91
50133--50541
61
6.7
61
84
6
540
37
20
16
25
1.93
50498--51067
230
2.5
230
84
2
716
38
22
15
23
1.92
51599--51642
22
2.0
22
95
0
79
43
45
0
11
1.40
52267--52358
29
3.2
30
75
9
93
19
11
9
58
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52267--52379
57
2.0
57
81
13
135
21
13
8
56
1.64
55390--55448
28
2.1
28
93
3
102
15
8
32
44
1.76
56040--56103
17
3.7
17
93
2
101
31
26
6
35
1.81
60815--60879
23
2.9
22
82
13
71
52
1
0
46
1.10
60813--60866
23
2.5
22
87
6
74
50
0
0
50
1.00
62621--62907
115
2.5
117
85
9
365
27
19
13
39
1.90
63421--63478
19
2.9
19
84
5
80
58
5
5
31
1.42
63420--63490
20
3.6
18
76
16
70
60
4
7
28
1.42
63806--63839
15
2.3
15
90
10
52
0
17
0
82
0.67
63797--63859
22
2.8
22
85
9
74
4
17
1
76
1.04
63806--63859
11
4.8
11
82
17
67
3
18
0
77
0.91

Tables:   1

The End!