Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001754.1 Hibiscus syriacus cultivar Beakdansim tig00003548_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66067

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10387--10469
40
2.1
40
93
0
139
25
20
14
39
1.90
13663--13705
21
2.0
21
82
8
52
46
9
2
41
1.48
16875--16905
15
2.1
15
100
0
62
45
12
0
41
1.42
19172--19286
31
3.7
31
77
10
101
40
8
2
48
1.48
19334--19400
33
2.1
32
86
5
91
55
0
1
43
1.09
19312--19396
40
2.1
40
83
12
104
58
0
2
38
1.11
19335--19430
28
3.2
30
73
14
81
55
0
4
40
1.19
19375--19440
28
2.3
29
84
10
91
53
0
9
37
1.33
19879--20010
68
1.9
69
87
1
194
48
6
7
37
1.58
23803--23971
54
3.1
55
87
4
234
35
13
19
31
1.90
24243--24809
81
7.0
81
83
5
626
36
11
22
28
1.90
29357--29514
55
2.9
55
87
4
221
35
13
20
30
1.91
29805--30435
81
7.7
81
86
1
848
35
12
24
28
1.91
29805--30457
244
2.7
243
85
3
855
35
11
24
28
1.91
42405--42429
11
2.3
11
100
0
50
16
52
16
16
1.76
46476--46508
16
2.1
16
94
0
57
33
27
6
33
1.81
50753--50799
19
2.4
19
79
10
51
27
12
8
51
1.69
51392--51433
20
2.0
20
86
4
57
26
16
19
38
1.92
51445--51513
20
3.5
20
75
20
72
27
13
26
33
1.93
51606--51655
26
1.9
26
87
0
73
32
28
6
34
1.81
57022--57089
20
3.4
20
70
8
66
22
17
27
32
1.96
56998--57089
40
2.3
40
88
0
130
21
19
27
31
1.97

Tables:   1

The End!