Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001756.1 Hibiscus syriacus cultivar Beakdansim tig00003552_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59864

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1637--1702
28
2.3
29
84
10
91
37
9
0
53
1.33
1677--1742
32
2.1
31
86
8
89
40
1
0
57
1.08
1783--1860
30
2.5
31
81
8
88
48
2
7
41
1.45
3565--3631
30
2.3
29
77
10
73
38
5
17
37
1.75
4117--4147
15
2.1
15
100
0
62
41
0
12
45
1.42
10557--10639
40
2.1
40
93
0
139
39
14
20
25
1.90
16789--16894
37
2.9
37
77
2
106
19
4
39
35
1.73
32439--32602
73
2.2
71
77
12
154
45
10
2
41
1.51
32496--32606
37
3.0
37
82
6
127
45
11
1
40
1.51
37790--37907
24
4.9
24
86
7
141
40
20
15
23
1.90
37790--37904
48
2.4
49
89
5
173
40
20
15
23
1.90
37766--37921
48
3.2
48
80
8
131
44
19
12
23
1.85
37770--37921
72
2.1
71
78
8
164
44
19
13
23
1.86
40301--40354
13
3.8
13
73
17
54
14
20
44
20
1.86
44728--44883
40
4.0
40
89
5
228
25
16
25
33
1.96
46854--46892
20
2.0
20
84
0
51
30
10
25
33
1.89
52763--52787
11
2.3
11
100
0
50
16
16
0
68
1.22
54837--54875
20
2.0
20
84
0
51
30
10
25
33
1.89

Tables:   1

The End!