Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001769.1 Hibiscus syriacus cultivar Beakdansim tig00003568_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98222

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7467--7514
23
2.1
23
100
0
96
22
37
10
29
1.88
8117--8154
20
1.9
20
88
0
58
21
26
10
42
1.85
9324--9408
31
2.7
31
92
0
134
50
8
18
22
1.73
10941--11016
30
2.5
29
85
10
98
26
6
31
35
1.82
10972--11134
39
4.2
39
82
3
213
25
7
31
35
1.84
12798--12832
3
11.3
3
93
6
61
65
0
34
0
0.93
29011--29056
21
2.2
22
80
11
60
32
17
21
28
1.96
29017--29057
21
2.0
21
90
0
64
34
17
21
26
1.95
33012--33083
36
2.0
36
94
0
126
27
26
22
23
1.99
60171--60230
31
1.9
31
89
0
93
63
8
1
26
1.32
61070--61104
18
1.9
18
88
0
52
54
25
17
2
1.57
62352--62391
2
20.0
2
100
0
80
50
0
0
50
1.00
62510--62629
30
4.0
30
81
4
152
27
26
15
30
1.96
62502--62633
60
2.2
60
89
2
194
28
25
15
30
1.96
62511--62654
30
4.8
30
82
5
107
26
26
15
31
1.95
63230--63274
23
2.0
23
82
8
56
42
0
13
44
1.43
70910--70954
22
2.0
23
82
4
56
37
0
0
62
0.96
72630--72673
22
2.0
22
95
0
79
40
6
22
29
1.80

Tables:   1

The End!