Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000177.1 Hibiscus syriacus cultivar Beakdansim tig00000311_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69199

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8813--8864
15
3.5
15
92
2
70
11
69
13
5
1.35
12457--12481
3
8.3
3
100
0
50
68
0
32
0
0.90
18377--18415
20
2.0
20
85
5
53
48
2
15
33
1.58
19092--19181
31
2.9
31
91
0
135
22
13
13
51
1.75
19919--19992
31
2.4
31
90
0
112
55
13
10
20
1.68
27574--27764
63
3.0
63
88
3
247
42
2
9
45
1.50
34600--34665
30
2.2
30
83
8
80
40
6
1
51
1.36
38777--38808
15
2.1
15
94
0
55
43
0
15
40
1.47
44324--45217
315
2.8
314
93
1
1520
38
14
11
36
1.82
48975--49044
31
2.3
31
94
0
122
45
8
4
41
1.54
50593--50662
31
2.3
31
89
0
104
47
2
1
48
1.25
59720--59789
7
10.1
7
85
1
88
20
0
35
44
1.52
59720--59789
21
3.4
21
90
2
106
20
0
35
44
1.52
62407--62453
22
2.1
22
96
0
85
21
44
12
21
1.85
62850--62935
20
4.3
20
93
0
145
9
19
22
48
1.77
64907--64956
4
12.5
4
82
0
64
26
2
4
68
1.18
65100--65175
21
3.6
21
84
10
93
22
34
17
26
1.96
66729--66803
20
3.7
20
82
3
87
41
16
17
25
1.89

Tables:   1

The End!