Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001773.1 Hibiscus syriacus cultivar Beakdansim tig00003575_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77728

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
825--867
14
3.2
13
78
12
50
67
0
0
32
0.91
11207--11781
144
4.1
137
82
8
561
33
11
19
35
1.87
11386--11781
142
2.8
143
86
4
505
34
10
19
35
1.86
13654--13679
2
13.0
2
100
0
52
50
0
0
50
1.00
16080--16141
25
2.5
25
97
0
115
20
16
25
37
1.93
19708--19830
30
4.1
30
92
1
194
31
26
20
21
1.98
19819--19916
31
3.2
30
78
13
117
32
18
19
29
1.96
20582--20626
21
2.1
21
87
0
63
15
24
28
31
1.96
25023--25145
30
4.1
30
93
1
203
30
25
21
21
1.99
25134--25231
31
3.2
30
78
13
117
32
18
19
29
1.96
25899--25943
21
2.1
21
87
0
63
15
24
28
31
1.96
26691--26755
17
3.6
17
71
15
58
24
30
24
20
1.98
26708--26771
21
3.2
21
69
24
66
20
28
26
25
1.99
26689--26784
38
2.5
38
91
0
156
23
28
22
25
2.00
26976--27030
17
3.2
17
70
10
58
30
18
7
43
1.77
27405--27475
35
2.0
36
97
2
135
19
32
30
16
1.95
27418--27477
20
3.2
20
65
29
60
16
38
28
16
1.91
33595--33660
17
3.6
17
69
15
51
27
27
24
21
1.99
33600--33689
38
2.4
38
88
0
135
25
26
24
23
2.00
34172--34213
21
2.0
21
90
0
66
21
35
28
14
1.92
34172--34218
21
2.3
20
85
7
60
21
31
34
12
1.91
34683--34752
34
2.1
32
92
5
113
31
14
31
22
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37448--37884
220
2.0
220
98
0
847
37
12
9
40
1.74
37917--37976
20
3.0
20
87
4
86
20
33
30
16
1.94
37969--38024
15
3.5
15
71
21
51
19
35
25
19
1.95
37942--38026
33
2.5
35
92
5
147
20
32
27
20
1.97
38208--38247
20
1.9
21
85
10
55
37
35
10
17
1.83
38462--38531
34
2.1
32
86
5
95
31
15
30
22
1.95
43486--43586
10
9.7
10
72
18
55
8
9
20
60
1.55
43483--43542
23
2.6
23
94
0
93
11
8
20
60
1.57
43516--43570
14
4.0
14
88
2
67
5
7
23
63
1.41
53161--53212
22
2.4
22
100
0
104
15
15
5
63
1.48
70908--70956
25
2.0
25
88
8
73
34
4
4
57
1.37
71332--71393
23
2.7
23
100
0
124
22
22
33
20
1.97
77329--77366
19
2.0
20
84
5
51
31
2
18
47
1.62

Tables:   1

The End!