Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001774.1 Hibiscus syriacus cultivar Beakdansim tig00003576_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78834

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
133--277
47
3.0
48
82
4
186
26
22
17
33
1.96
3361--3428
31
2.2
31
100
0
136
39
13
13
33
1.83
5781--5891
17
6.5
17
78
10
111
63
5
12
18
1.46
5782--5891
51
2.2
51
85
6
143
64
5
12
17
1.45
5868--5919
17
3.2
16
78
10
52
63
9
13
13
1.52
10584--10668
33
2.5
33
88
3
134
41
37
10
10
1.74
12105--12168
19
3.2
20
72
14
53
43
1
1
53
1.19
12114--12163
20
2.5
20
78
12
59
40
2
2
56
1.22
12081--12167
31
2.8
30
79
10
95
41
1
3
54
1.25
12886--12946
31
2.0
31
83
6
79
54
3
1
40
1.27
14936--14990
21
2.6
21
100
0
110
36
18
14
30
1.91
30801--30855
22
2.5
22
96
0
101
36
34
16
12
1.87
32041--32082
21
2.0
21
95
0
75
26
28
21
23
1.99
32189--32254
19
3.5
19
78
0
69
37
12
7
42
1.71
32319--32391
30
2.5
30
88
2
112
39
13
6
39
1.72
34331--34377
22
2.2
22
84
3
60
59
12
17
10
1.60
41152--41176
11
2.3
11
100
0
50
84
0
16
0
0.63
41181--41207
4
6.8
4
100
0
54
77
0
0
22
0.76
45012--45055
2
22.0
2
95
0
79
47
0
2
50
1.13
45053--45425
4
93.8
4
97
1
705
25
0
24
49
1.53
48007--48162
77
2.0
77
87
0
222
20
14
18
46
1.83
58896--58949
19
2.8
20
94
5
101
35
0
0
64
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65604--65720
3
39.0
3
83
3
119
41
0
0
58
0.98
65601--65647
23
2.0
24
95
4
87
31
0
0
68
0.90
67049--67099
20
2.6
20
81
3
59
25
25
27
21
1.99
67660--67724
31
2.1
31
85
5
87
21
20
23
35
1.96
67710--67808
30
3.3
30
92
1
155
21
22
26
30
1.99
68074--68104
2
16.0
2
93
6
55
51
0
0
48
1.00
69160--69315
64
2.4
64
76
9
156
33
21
18
26
1.96
69283--69333
20
2.6
20
81
3
59
25
25
27
21
1.99
69893--69970
31
2.5
31
78
12
79
21
19
23
35
1.96
69943--70044
30
3.4
30
89
1
152
21
20
25
32
1.98
70308--70338
2
16.0
2
93
6
55
51
0
0
48
1.00
71218--71253
18
2.0
18
94
0
63
44
36
5
13
1.68
76012--76080
8
8.9
8
81
10
81
82
0
14
2
0.78
78399--78574
74
2.4
75
76
12
193
35
14
19
31
1.91

Tables:   1

The End!