Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001779.1 Hibiscus syriacus cultivar Beakdansim tig00003596_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66287

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4920--4975
26
2.2
26
96
0
103
39
12
14
33
1.83
11067--11112
23
2.0
22
83
4
56
60
4
2
32
1.28
11149--11226
26
3.1
24
76
10
75
51
0
0
48
1.00
11420--11489
23
3.1
21
74
15
61
58
1
1
38
1.16
11524--11573
13
4.0
13
82
12
61
60
0
0
40
0.97
11525--11584
26
2.3
26
78
21
72
63
0
0
36
0.95
14436--14488
24
2.2
24
82
0
61
39
18
16
24
1.91
15204--15380
29
6.2
29
75
8
148
49
15
3
31
1.62
21621--21724
24
4.3
24
88
0
145
41
19
15
24
1.89
21641--21736
48
2.0
48
87
0
138
45
17
11
25
1.82
22332--22510
29
6.3
29
74
10
145
49
13
4
32
1.63
22332--22443
59
1.9
59
85
3
154
49
12
2
35
1.55
22340--22467
59
2.2
59
80
5
143
51
9
3
35
1.53
26225--26257
8
4.0
8
92
7
57
48
0
12
39
1.40
26220--26260
16
2.7
15
85
14
57
46
0
9
43
1.36
31134--31173
21
1.9
21
94
0
71
42
17
7
32
1.77
31942--31994
19
2.8
20
82
5
65
50
5
13
30
1.64
33641--33678
2
19.0
2
100
0
76
50
0
0
50
1.00
41476--41514
21
1.9
20
84
5
51
28
15
17
38
1.91
59735--59797
32
2.0
32
90
0
99
31
22
12
33
1.91
62144--62280
3
45.0
3
97
2
256
0
33
0
66
0.92
64425--64466
21
2.0
21
95
0
75
19
21
23
35
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64578--64607
11
2.6
11
94
5
51
36
26
0
36
1.57
65550--65751
106
1.9
106
83
12
263
19
13
17
49
1.80

Tables:   1

The End!