Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001784.1 Hibiscus syriacus cultivar Beakdansim tig00003603_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60808

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2146--2300
31
5.1
31
85
6
208
34
20
16
28
1.94
4120--4205
29
2.9
29
77
13
77
33
17
6
41
1.76
4124--4205
30
2.8
29
77
12
78
32
17
7
42
1.76
9532--9596
31
2.1
31
88
5
96
36
13
18
30
1.90
11446--11510
29
2.2
29
81
7
78
32
12
7
47
1.69
11810--11869
22
2.7
22
76
0
66
36
23
16
23
1.94
17471--17856
55
7.1
55
89
0
508
30
15
17
36
1.91
25465--25565
30
3.3
29
77
13
96
37
7
8
45
1.65
27333--27404
33
2.2
32
90
4
110
15
22
5
56
1.59
37202--37229
14
2.0
14
100
0
56
28
7
7
57
1.52
38921--38972
18
2.8
18
80
13
70
17
21
11
50
1.77
42948--42998
18
2.8
18
80
14
68
17
21
11
49
1.79
56506--56542
20
1.9
19
89
10
58
45
10
24
18
1.81
57835--57900
27
2.4
27
94
0
114
27
19
16
36
1.93
57858--57929
23
2.9
24
84
12
76
26
19
18
36
1.94
59279--59333
22
2.5
22
77
8
60
43
5
3
47
1.44
60399--60437
19
2.1
19
95
0
69
17
10
5
66
1.39
60492--60529
2
19.5
2
83
5
51
50
0
2
47
1.15
60489--60521
15
2.2
15
94
0
57
45
0
3
51
1.16

Tables:   1

The End!