Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001788.1 Hibiscus syriacus cultivar Beakdansim tig00003608_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56766

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3988--4078
2
45.0
2
91
6
148
48
0
3
48
1.18
4671--4719
22
2.2
22
92
0
80
34
12
14
38
1.83
4672--4728
22
2.6
22
81
10
71
38
10
12
38
1.77
9259--9318
31
1.9
31
93
6
104
36
10
26
26
1.88
9902--9978
22
3.5
22
89
1
120
35
15
12
36
1.86
10839--10994
78
2.0
78
97
0
294
28
19
10
40
1.86
16899--16942
2
22.0
2
95
0
79
50
2
0
47
1.13
21691--21730
21
1.9
21
89
0
62
32
25
27
15
1.95
27784--27868
10
8.8
9
70
14
53
17
28
25
28
1.98
27794--27842
20
2.4
20
86
10
64
16
30
22
30
1.96
27805--27872
19
3.5
20
84
9
72
16
29
27
26
1.97
27835--27874
9
4.3
9
84
6
53
15
30
30
25
1.95
27876--27913
17
2.2
17
95
0
67
21
47
21
10
1.80
30395--30488
35
2.7
35
91
0
143
47
10
9
31
1.70
36410--36479
29
2.4
29
95
4
124
18
17
24
40
1.91
38847--38962
61
1.9
61
96
0
214
25
34
21
18
1.96
39308--39373
34
1.9
34
100
0
132
22
27
12
37
1.90
39437--39467
16
1.9
16
93
0
53
58
0
3
38
1.15
47544--47579
16
2.2
16
90
0
54
38
0
13
47
1.44
51918--52046
60
2.2
59
81
4
143
34
16
2
47
1.59
51947--52064
60
2.0
60
84
3
157
34
16
3
45
1.64
53860--53901
16
2.6
16
92
0
66
26
26
7
40
1.81

Tables:   1

The End!