Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001795.1 Hibiscus syriacus cultivar Beakdansim tig00003628_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54269

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5838--5942
36
2.9
36
88
4
149
44
19
17
19
1.87
7344--7374
15
2.1
15
93
0
53
38
0
3
58
1.15
10682--10717
2
18.0
2
88
0
54
50
5
44
0
1.25
20066--20106
17
2.4
17
100
0
82
26
24
19
29
1.98
24702--24736
16
2.1
17
94
5
63
31
8
25
34
1.86
33589--33651
24
2.6
24
82
0
81
9
25
12
52
1.69
35874--35928
29
2.0
27
86
10
76
61
12
0
25
1.31
36090--36149
18
3.2
17
77
15
57
73
5
11
10
1.24
40679--40751
18
3.9
18
75
7
74
26
31
21
20
1.98
43053--43101
26
1.9
25
87
4
71
38
12
2
46
1.53
44879--44910
16
2.1
16
94
5
57
71
0
0
28
0.86

Tables:   1

The End!