Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001801.1 Hibiscus syriacus cultivar Beakdansim tig00003641_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91028

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9610--9634
12
2.1
12
100
0
50
60
0
0
40
0.97
9769--9804
18
1.9
19
88
5
56
47
0
0
52
1.00
9771--9815
20
2.2
21
88
4
65
53
4
0
42
1.21
9785--9843
29
2.1
28
84
9
77
52
5
0
42
1.23
11977--12063
36
2.3
39
73
18
94
34
1
1
63
1.10
20966--21015
21
2.4
21
89
0
82
18
6
8
68
1.36
27193--27254
31
2.0
31
100
0
124
38
16
16
29
1.90
35210--35364
80
1.9
80
97
0
292
21
18
20
39
1.93
35610--35686
37
2.1
37
85
4
102
48
1
3
46
1.28
37638--37670
2
16.5
2
100
0
66
51
0
0
48
1.00
48992--49040
18
2.9
17
91
8
66
48
16
18
16
1.81
49002--49040
18
2.2
18
100
0
78
46
17
20
15
1.84
56674--56734
23
2.7
23
84
0
86
37
26
18
18
1.93
59509--59560
22
2.2
24
83
12
65
26
5
17
50
1.69
59619--59719
2
50.5
2
100
0
202
50
0
0
49
1.00
69882--69906
11
2.3
11
100
0
50
60
16
12
12
1.60
70536--70599
31
2.1
31
96
0
119
31
12
12
43
1.80
72049--72086
2
19.0
2
100
0
76
50
0
50
0
1.00
74800--74843
23
2.0
22
86
13
63
59
11
18
11
1.61
75200--75347
58
2.5
58
77
11
151
35
17
2
45
1.60
86413--86509
32
3.0
32
98
0
185
25
18
21
34
1.96

Tables:   1

The End!