Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001802.1 Hibiscus syriacus cultivar Beakdansim tig00003644_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65073

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
976--1092
52
2.2
52
100
0
234
31
23
19
25
1.98
8333--8411
28
3.0
28
79
15
71
18
5
22
53
1.64
9824--9949
61
2.1
61
89
3
191
21
34
25
19
1.96
9824--9966
61
2.3
61
86
2
180
21
31
27
19
1.97
12374--12980
216
2.8
215
89
4
913
24
12
26
36
1.91
13522--13567
18
2.7
17
90
6
67
28
26
6
39
1.81
13600--13624
12
2.1
12
100
0
50
32
16
8
44
1.76
14755--14785
13
2.4
13
94
0
53
29
48
16
6
1.70
26810--26837
8
3.5
8
100
0
56
39
0
10
50
1.37
30354--30382
9
3.3
9
90
9
51
89
0
0
10
0.48
31331--31487
53
2.9
55
82
3
210
30
15
26
27
1.96
31330--31508
55
3.3
55
82
3
238
30
14
26
29
1.95
31492--31909
156
2.7
156
84
5
567
33
18
24
22
1.97
31495--31907
51
7.9
51
78
10
345
33
19
24
22
1.97
34962--35048
46
1.9
45
81
6
104
18
10
10
60
1.56
47142--47170
14
2.1
14
100
0
58
44
6
20
27
1.77
56187--56224
19
2.0
19
100
0
76
21
15
26
36
1.93
58147--58216
24
3.0
24
85
2
88
30
17
22
30
1.97
58148--58234
23
3.7
24
84
3
97
29
14
24
31
1.95
64970--65015
24
1.9
24
81
0
56
28
23
21
26
1.99
64989--65037
22
2.1
24
85
7
66
34
22
22
20
1.97

Tables:   1

The End!