Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001804.1 Hibiscus syriacus cultivar Beakdansim tig00003647_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52796

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6401--6473
21
3.5
20
78
10
76
30
21
17
30
1.97
10245--10303
26
2.3
26
96
0
109
33
23
15
27
1.95
12920--13192
44
6.2
44
80
0
316
30
15
23
30
1.96
19133--19181
22
2.2
22
88
0
71
34
12
12
40
1.80
19701--19906
82
2.5
81
81
6
227
28
21
16
32
1.96
23034--23067
18
1.9
17
88
5
50
32
17
23
26
1.97
26962--27054
23
4.1
23
78
10
77
25
17
26
30
1.97
31186--31238
21
2.6
21
82
8
65
30
20
22
26
1.98
31838--32154
83
3.8
82
76
6
266
31
11
21
35
1.89
33596--33799
82
2.5
83
82
4
243
32
15
17
34
1.91
33671--33799
41
3.2
40
68
22
97
31
17
18
33
1.94
36367--36396
15
2.1
15
93
6
53
30
10
13
46
1.75
41892--41982
21
4.3
20
74
16
69
39
19
36
4
1.72
42306--42418
44
2.6
43
80
4
127
33
17
17
30
1.94
42412--42496
43
2.0
43
92
0
143
29
20
22
28
1.98
42508--42545
18
2.1
18
100
0
76
42
31
10
15
1.81
42589--42671
43
1.9
43
82
4
105
31
25
13
30
1.93
43887--43937
21
2.5
21
96
3
95
54
0
33
11
1.37
52448--52477
15
2.0
15
93
0
51
26
13
16
43
1.85

Tables:   1

The End!