Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001816.1 Hibiscus syriacus cultivar Beakdansim tig00003676_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67067

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2723--2789
30
2.3
30
84
2
91
47
4
14
32
1.65
21626--21733
54
2.0
54
92
0
180
38
23
18
19
1.93
26390--26806
54
7.9
54
81
6
462
35
17
14
31
1.91
26419--26717
150
2.0
150
88
1
447
35
18
14
31
1.91
30793--31015
54
4.1
54
91
0
347
35
17
14
31
1.90
34285--34847
81
7.0
81
86
2
702
27
21
11
39
1.88
34797--35119
68
4.8
68
92
1
540
30
23
15
30
1.95
35332--35478
55
2.7
55
88
1
206
31
17
13
36
1.89
40058--40622
81
7.0
81
84
1
686
27
22
12
38
1.89
40088--40622
242
2.2
243
88
1
779
27
22
12
37
1.90
40572--40894
68
4.8
68
91
0
513
29
23
16
30
1.96
40572--40894
135
2.4
136
92
0
513
29
23
16
30
1.96
41105--41272
55
3.0
55
87
2
221
28
20
14
36
1.92
45906--46400
81
6.1
81
85
0
630
29
21
10
39
1.86
45834--46400
162
3.5
162
87
0
711
28
20
10
40
1.86
46350--46537
68
2.8
68
85
4
245
30
22
14
32
1.94
46748--46900
55
2.8
56
84
5
188
33
18
11
35
1.88
60595--61574
496
2.0
496
95
0
1780
27
22
15
34
1.94
65273--65315
20
2.2
20
86
0
59
30
13
20
34
1.92

Tables:   1

The End!