Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001828.1 Hibiscus syriacus cultivar Beakdansim tig00003696_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48392

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21015--21069
21
2.6
21
100
0
110
34
12
25
27
1.92
30631--31016
184
2.1
182
90
1
612
45
8
3
42
1.52
30953--30995
20
2.2
20
83
8
52
41
2
2
53
1.26
31897--31935
3
13.0
3
100
0
78
66
0
0
33
0.92
32790--32882
39
2.3
40
77
15
102
32
19
18
30
1.95
33532--33581
22
2.3
22
82
6
57
36
12
16
36
1.85
34544--34734
40
4.6
41
71
9
102
30
19
17
32
1.95
35007--35036
7
4.3
7
95
0
51
30
40
13
16
1.87
37239--37341
36
2.9
36
86
2
154
42
17
10
29
1.83
38973--39181
88
2.4
88
86
0
294
32
23
15
28
1.95
38973--39181
44
4.8
44
79
2
224
32
23
15
28
1.95
39031--39207
88
2.0
88
83
3
223
34
23
15
26
1.94
39199--39316
42
2.8
42
84
2
137
33
22
15
28
1.95
39303--39356
27
1.9
28
88
7
83
24
20
24
31
1.98
41680--41725
18
2.5
19
75
10
51
58
0
0
41
0.98
42393--42464
35
2.1
35
97
0
135
29
2
11
56
1.48
45465--45602
65
2.1
65
93
0
231
23
33
17
26
1.96
45984--46028
21
2.1
22
87
4
65
28
0
15
55
1.41
46005--46066
27
2.2
28
88
11
99
29
0
12
58
1.35
46559--46601
22
2.0
22
81
4
52
39
0
9
51
1.34
46737--46780
20
2.2
20
84
8
54
45
9
6
38
1.63

Tables:   1

The End!