Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001831.1 Hibiscus syriacus cultivar Beakdansim tig00003703_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61134

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8889--8998
23
5.0
22
73
13
93
32
26
19
21
1.97
13378--13578
64
3.1
64
81
9
230
32
24
16
26
1.96
13426--13584
64
2.5
64
87
4
232
32
25
16
26
1.96
22048--22190
64
2.2
63
85
8
182
30
26
16
25
1.97
22162--22210
19
2.6
19
84
9
57
24
30
18
26
1.98
26258--26314
22
2.6
22
91
0
96
35
31
10
22
1.88
34447--34483
19
2.0
19
89
5
58
21
24
2
51
1.61
36725--36779
23
2.4
23
88
8
78
30
0
0
69
0.89
38005--38065
24
2.6
25
78
17
69
44
0
0
55
0.99
42807--42832
2
13.0
2
100
0
52
0
50
0
50
1.00
45770--46050
145
1.9
146
89
2
438
29
15
16
38
1.90
47758--47958
109
1.8
109
88
4
307
36
15
14
32
1.88
58265--58306
21
2.0
22
86
13
61
28
0
4
66
1.12

Tables:   1

The End!