Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001841.1 Hibiscus syriacus cultivar Beakdansim tig00003726_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75031

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16445--16478
18
1.9
18
88
5
52
26
29
26
17
1.98
23294--23336
23
1.9
23
90
4
70
53
4
9
32
1.53
23295--23343
23
2.2
23
81
3
55
59
4
8
28
1.45
23348--23397
9
5.8
9
85
2
50
60
2
0
38
1.09
23368--23397
8
3.6
8
95
4
51
56
0
0
43
0.99
24068--24093
2
13.0
2
100
0
52
50
0
0
50
1.00
24253--24294
21
2.0
21
95
0
75
42
7
14
35
1.73
33658--33730
2
36.5
2
100
0
146
50
0
0
49
1.00
33781--33818
6
6.3
6
100
0
76
50
0
50
0
1.00
36530--36557
2
14.0
2
100
0
56
50
0
0
50
1.00
48181--48240
2
30.0
2
96
0
111
48
0
1
50
1.11
58373--58412
2
20.0
2
100
0
80
50
0
0
50
1.00
58461--58486
6
4.3
6
100
0
52
50
0
50
0
1.00
61189--61216
2
14.0
2
100
0
56
50
0
0
50
1.00
67164--67223
4
15.0
4
81
13
70
25
3
21
50
1.64

Tables:   1

The End!