Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000185.1 Hibiscus syriacus cultivar Beakdansim tig00000327_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76142

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1614--1694
27
3.0
25
81
16
83
79
1
4
14
0.97
1617--1715
17
5.6
17
74
10
67
77
1
3
18
0.95
1629--1715
44
2.0
44
85
12
119
78
1
3
17
0.96
1618--1715
23
4.6
20
75
17
74
77
1
3
18
0.95
1646--1715
23
3.2
23
75
21
78
77
1
1
20
0.93
1617--1714
45
2.2
44
80
8
119
77
1
3
18
0.95
1617--1726
24
4.5
24
73
15
75
75
0
3
20
1.01
1668--1800
34
4.0
32
76
13
103
66
0
2
30
1.09
1693--1777
43
2.0
43
86
4
118
61
0
2
36
1.09
17363--17514
60
2.6
58
86
2
196
35
14
17
32
1.90
18741--18771
2
15.5
2
93
0
53
48
0
0
51
1.00
20733--20763
3
10.3
3
100
0
62
64
0
35
0
0.94
22125--22180
23
2.4
24
84
3
78
62
14
12
10
1.55
22186--22241
23
2.4
23
81
0
76
60
16
7
16
1.56
22433--22465
14
2.4
14
94
0
57
60
9
12
18
1.57
29573--29613
20
2.1
19
86
4
55
46
9
0
43
1.36
37365--37395
16
1.9
16
93
0
53
25
0
6
67
1.14
51805--51869
31
2.1
31
97
0
121
29
10
20
40
1.86
55328--55359
13
2.6
13
90
9
50
31
0
0
68
0.90
55966--55996
12
2.6
12
94
0
53
19
45
22
12
1.84
64121--64197
30
2.6
30
82
0
91
24
15
9
50
1.73
65069--65122
10
5.6
10
75
16
60
74
3
1
20
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65069--65121
28
1.9
27
92
3
88
73
3
1
20
1.08
65069--65121
27
1.9
28
88
11
83
73
3
1
20
1.08
66395--66436
11
4.0
10
82
17
50
30
0
2
66
1.04
66395--66435
20
2.0
21
86
13
59
31
0
2
65
1.05

Tables:   1

The End!