Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001852.1 Hibiscus syriacus cultivar Beakdansim tig00003750_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71880

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6850--6901
23
2.3
23
83
12
63
57
1
11
28
1.44
12390--12430
16
2.5
17
80
11
50
65
2
2
29
1.18
25466--25519
26
2.1
26
100
0
108
44
7
14
33
1.73
31711--31776
17
4.0
17
75
14
59
43
0
0
56
0.99
33077--33114
12
3.2
12
81
3
51
28
2
2
65
1.19
33122--33146
10
2.5
10
100
0
50
60
0
0
40
0.97
36928--36986
23
2.6
23
78
7
66
64
1
1
32
1.13
41495--41522
13
2.2
13
100
0
56
85
0
7
7
0.73
41807--41850
14
3.1
14
76
0
52
52
29
0
18
1.46
41812--41855
21
2.2
20
83
4
52
54
22
0
22
1.45
44911--44954
12
3.8
12
77
17
56
38
25
15
20
1.92
44905--44954
23
2.2
23
92
0
82
36
24
18
22
1.95
52123--52204
41
2.0
41
97
0
155
37
24
23
14
1.92
60510--60563
27
2.0
27
85
7
74
72
0
1
25
0.95
60510--60579
27
2.5
27
79
9
70
67
0
2
30
1.05
60691--60722
2
16.0
2
100
0
64
50
0
50
0
1.00
60897--60945
24
2.0
25
84
11
66
36
2
2
59
1.21
71198--71250
27
2.0
27
96
3
99
33
24
15
26
1.95

Tables:   1

The End!