Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001853.1 Hibiscus syriacus cultivar Beakdansim tig00003752_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54680

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9951--10009
29
2.0
29
96
0
109
47
13
15
23
1.81
13237--13379
31
4.6
31
98
0
268
38
23
19
18
1.93
13962--13996
18
1.9
18
100
0
70
25
34
28
11
1.91
17140--17184
19
2.5
17
79
10
54
57
11
0
31
1.33
17550--17721
31
5.5
31
96
0
308
38
22
19
19
1.93
21229--21287
29
2.0
29
100
0
118
49
13
13
23
1.78
27006--27039
16
2.1
16
94
0
59
32
26
8
32
1.87
30670--30721
26
2.0
26
100
0
104
53
0
0
46
1.00
34441--34624
60
3.1
60
76
9
187
30
24
5
39
1.78
34816--34937
60
2.0
60
81
6
140
41
4
18
35
1.70
35366--35451
21
4.1
21
83
5
111
32
27
19
19
1.97
35368--35450
42
2.0
42
95
0
148
31
28
20
19
1.97
35707--35753
2
23.5
2
100
0
94
48
0
0
51
1.00
38042--38078
2
18.5
2
100
0
74
48
0
0
51
1.00
42006--42039
16
2.1
16
94
0
59
32
8
26
32
1.87
42788--42820
15
2.1
16
88
5
50
51
15
24
9
1.72

Tables:   1

The End!