Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001864.1 Hibiscus syriacus cultivar Beakdansim tig00003772_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56122

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
252--551
147
2.0
147
97
2
568
36
19
16
27
1.93
1017--1167
66
2.3
67
89
4
225
15
26
28
29
1.96
2529--2580
24
2.2
24
86
6
70
32
19
3
44
1.69
11169--11219
16
3.4
16
69
20
56
43
15
9
31
1.80
11170--11227
28
2.1
28
100
0
116
41
15
6
36
1.74
22725--22761
17
2.1
19
85
10
51
29
0
2
67
1.04
44644--44675
2
16.0
2
100
0
64
50
0
0
50
1.00
49181--49255
37
2.0
37
97
0
141
21
40
22
16
1.91
49715--49886
89
1.9
89
89
2
265
36
11
7
44
1.68
50131--50163
17
2.1
17
88
11
52
24
9
6
60
1.49
53426--53614
66
2.9
66
95
0
324
31
25
26
15
1.96
53594--53676
24
3.3
24
86
8
112
34
31
25
8
1.86
53597--53685
27
3.4
27
83
10
105
38
32
22
6
1.80
53621--53701
27
3.0
27
87
0
108
34
32
25
7
1.84

Tables:   1

The End!