Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001869.1 Hibiscus syriacus cultivar Beakdansim tig00003786_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52154

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
331--363
12
2.5
13
90
9
50
45
6
15
33
1.70
546--570
3
8.3
3
100
0
50
36
0
32
32
1.58
3618--3660
21
2.0
21
81
0
50
30
30
25
13
1.94
3640--3791
66
2.2
69
90
3
238
29
28
26
15
1.96
4400--4444
23
2.0
23
86
0
63
20
24
28
26
1.99
10451--10493
21
2.0
21
81
0
50
30
30
25
13
1.94
10473--10623
67
2.2
68
92
1
250
30
27
27
14
1.95
11101--11404
149
2.0
149
99
0
599
27
16
20
36
1.93
11383--11427
23
2.0
23
86
0
63
20
24
28
26
1.99
20605--20629
2
12.5
2
100
0
50
48
0
0
52
1.00
41266--41458
65
3.0
65
94
0
323
43
7
7
41
1.60
41827--41891
22
2.9
23
85
14
84
50
12
20
16
1.77
41896--41946
7
7.3
7
73
8
50
76
3
1
17
1.03
41896--41946
21
2.4
21
80
6
59
76
3
1
17
1.03
43428--43575
31
4.8
30
73
11
102
47
6
4
41
1.47
43426--43578
62
2.5
61
84
3
191
46
7
3
42
1.49
43477--43593
31
3.7
31
78
6
128
46
8
4
41
1.54
44808--44835
2
14.0
2
100
0
56
0
50
0
50
1.00
44835--44879
2
22.5
2
100
0
90
48
0
0
51
1.00

Tables:   1

The End!