Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001873.1 Hibiscus syriacus cultivar Beakdansim tig00003797_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80098

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1848--1872
7
3.6
7
100
0
50
28
0
24
48
1.52
8300--8349
2
25.0
2
100
0
100
50
0
0
50
1.00
29024--29145
62
2.0
62
81
0
145
36
9
13
40
1.77
30301--30339
19
2.1
19
100
0
78
25
15
23
35
1.94
41230--41265
6
6.0
6
86
0
54
44
16
5
33
1.71
41230--41263
12
2.8
12
100
0
68
44
17
5
32
1.73
43248--43282
18
1.9
18
88
11
54
54
5
17
22
1.64
43339--43382
22
2.0
22
86
4
63
45
0
22
31
1.53
44260--44712
149
3.0
149
98
0
879
28
17
19
34
1.95
44691--44735
23
2.0
23
81
0
54
20
22
28
28
1.98
45844--45876
2
16.5
2
100
0
66
48
0
0
51
1.00
47199--47258
31
1.9
32
83
10
79
50
0
11
38
1.39
48863--48982
35
3.4
35
77
2
107
17
27
19
35
1.94
49184--49269
45
1.9
45
83
4
111
37
2
6
53
1.41
49676--49728
21
2.4
23
78
15
58
39
9
0
50
1.35
50870--50928
31
1.9
31
89
0
91
27
11
6
54
1.62
50919--50986
27
2.6
26
88
4
75
36
10
2
50
1.52
50928--50986
27
2.2
27
96
0
109
37
8
3
50
1.49
52883--52938
29
1.9
29
82
7
69
32
7
21
39
1.80
56534--56884
177
2.0
177
94
0
621
43
12
9
35
1.74
56889--56915
2
13.5
2
100
0
54
51
0
0
48
1.00
67205--67262
25
2.3
25
80
14
66
55
3
8
32
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77467--77560
49
1.9
49
91
0
152
26
25
27
20
1.99

Tables:   1

The End!