Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001879.1 Hibiscus syriacus cultivar Beakdansim tig00003815_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72063

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7106--7143
19
2.0
19
94
0
67
39
0
23
36
1.55
14648--14672
12
2.1
12
100
0
50
24
24
24
28
2.00
22525--22581
21
2.7
21
80
0
69
21
31
12
35
1.90
22534--22639
54
2.0
54
92
0
176
20
29
12
37
1.89
40739--40864
7
17.3
7
69
19
64
76
0
15
7
0.99
40760--40867
38
2.7
38
75
20
114
77
0
15
6
0.96
42194--42555
104
3.4
102
79
8
325
27
16
27
29
1.96
42209--42611
51
7.6
55
81
8
347
28
16
26
28
1.97
46999--47030
16
2.0
16
93
0
55
34
0
3
62
1.11
52816--52853
20
1.9
20
88
0
58
21
26
10
42
1.85
53967--53992
2
13.0
2
100
0
52
50
0
50
0
1.00
59079--59151
37
1.9
38
91
2
121
45
13
20
20
1.85
59663--59709
25
1.9
24
87
12
69
72
4
2
21
1.12
61697--61722
2
13.0
2
100
0
52
50
0
0
50
1.00
65600--65670
35
2.0
35
88
0
106
39
22
1
36
1.63
68653--68691
17
2.3
17
86
0
51
43
7
17
30
1.77
68665--68698
17
2.0
17
94
0
59
38
11
20
29
1.88
69105--69143
2
20.0
2
94
5
71
51
0
0
48
1.00
69702--69747
24
1.9
24
100
0
92
45
26
4
23
1.71

Tables:   1

The End!