Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001885.1 Hibiscus syriacus cultivar Beakdansim tig00003826_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84887

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1056--1120
25
2.6
25
80
11
78
49
1
0
49
1.10
1147--1186
19
2.1
18
86
13
53
60
2
0
37
1.11
2758--3657
180
5.0
180
98
1
1720
29
5
24
39
1.79
3684--3818
67
2.0
67
91
0
216
23
20
7
48
1.75
11245--11313
32
2.2
32
86
0
93
20
46
0
33
1.51
11254--11318
32
2.0
32
96
0
121
18
41
0
40
1.51
20260--20317
29
2.0
29
89
0
89
13
36
27
22
1.92
20360--20406
14
3.4
14
87
0
67
25
36
29
8
1.86
20388--20459
33
2.2
33
82
0
81
25
26
37
11
1.89
20398--20472
33
2.3
33
83
4
98
26
24
40
9
1.85
20476--20589
29
3.9
29
95
0
192
21
28
36
13
1.91
25472--25579
55
2.0
55
92
0
180
27
13
12
45
1.81
38370--39272
105
8.6
105
95
0
1572
22
22
18
36
1.95
40202--40258
11
5.4
11
82
16
75
7
8
0
84
0.79
40196--40298
8
14.0
8
75
22
77
10
9
0
79
0.93
40183--40313
22
5.8
22
76
14
94
9
11
0
78
0.96
40196--40295
29
3.5
28
81
14
114
10
10
0
80
0.92
40202--40277
11
6.5
11
75
20
66
9
6
0
84
0.78
40235--40298
8
8.2
8
87
8
80
12
9
0
78
0.97
40231--40311
37
2.2
37
82
6
101
11
9
0
79
0.95
61199--61259
25
2.4
28
76
18
69
59
0
1
39
1.08
76625--76708
32
2.7
32
73
12
84
34
16
16
32
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77546--77707
64
2.5
63
77
7
157
28
23
17
30
1.97
81371--81425
24
2.3
25
84
9
71
40
12
0
47
1.42
81371--81433
25
2.6
24
80
9
58
41
14
0
44
1.45

Tables:   1

The End!