Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001890.1 Hibiscus syriacus cultivar Beakdansim tig00003835_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56880

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5472--5535
31
2.1
31
96
0
119
37
15
18
28
1.92
5479--5545
31
2.4
28
87
12
93
34
14
19
31
1.92
6599--6660
26
2.3
27
83
8
74
53
1
6
38
1.37
15774--15815
22
1.9
22
85
0
57
30
19
9
40
1.83
18130--18175
23
2.2
20
76
23
51
54
4
2
39
1.32
21416--21454
20
2.0
20
84
0
51
56
0
5
38
1.22
22815--22989
29
5.9
30
77
17
120
37
5
0
57
1.23
22836--22984
29
5.1
29
83
10
178
36
5
0
57
1.21
23122--23211
28
3.3
28
71
20
82
51
0
3
45
1.18
32898--32949
25
2.0
26
85
3
70
61
13
0
25
1.32
33093--33117
12
2.1
12
100
0
50
36
24
0
40
1.55
34072--34171
51
1.9
52
82
6
123
31
3
14
52
1.56
39208--39362
41
3.8
41
82
1
186
27
16
16
39
1.90
39208--39362
81
1.9
82
85
4
215
27
16
16
39
1.90
40258--40316
4
14.8
4
100
0
118
25
0
25
49
1.51
44010--44055
24
1.9
24
100
0
92
26
6
34
32
1.82
46287--46329
21
2.0
22
90
4
70
23
34
25
16
1.95
48378--48415
6
6.3
6
100
0
76
50
0
50
0
1.00
48387--48437
18
2.8
18
85
5
59
58
1
39
0
1.09
49496--49584
42
2.1
44
87
6
130
35
21
16
25
1.94
53062--53123
23
2.7
23
100
0
124
19
25
33
20
1.96

Tables:   1

The End!