Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001897.1 Hibiscus syriacus cultivar Beakdansim tig00003844_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45113

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2832--2861
5
6.0
5
100
0
60
40
20
0
40
1.52
12887--12919
2
16.5
2
100
0
66
51
0
0
48
1.00
12917--13275
5
71.8
5
95
0
466
53
23
1
21
1.53
14992--15093
34
2.9
36
89
5
163
44
13
13
28
1.82
14990--15127
37
3.8
37
84
4
156
42
13
13
31
1.82
15615--15662
15
3.1
15
77
11
51
25
10
2
62
1.38
15660--15694
16
2.1
18
89
10
56
25
8
0
65
1.21
18860--18947
7
11.7
7
71
15
61
78
6
12
2
1.04
18860--18927
29
2.3
29
82
10
84
79
5
13
1
0.98
18860--18947
16
5.9
14
73
12
59
78
6
12
2
1.04
18914--18957
22
2.0
23
86
4
63
75
9
13
2
1.14
19575--19623
22
2.2
22
92
0
80
32
24
14
28
1.94
20365--20688
72
4.6
73
74
10
212
26
19
14
39
1.90
20407--20688
36
8.0
36
77
8
285
26
19
13
40
1.89
20405--20651
101
2.4
103
84
8
304
25
18
14
40
1.89
20427--20751
138
2.4
137
82
2
409
28
20
12
39
1.88
21463--22399
105
9.0
105
92
1
1434
33
25
17
23
1.96
22947--23048
34
2.9
36
89
5
163
44
13
13
28
1.82
22945--23082
37
3.8
37
84
4
156
42
13
13
31
1.82
23619--23653
16
2.1
18
89
10
56
25
8
0
65
1.21
27691--27742
2
26.0
2
100
0
104
50
0
0
50
1.00
31085--31110
5
5.2
5
100
0
52
23
57
19
0
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32101--32162
23
2.7
23
87
0
97
27
25
25
20
1.99
40916--40953
19
2.0
20
84
5
51
55
2
5
36
1.37
41385--41431
22
2.2
21
84
3
58
65
4
6
23
1.33
43785--43827
23
1.9
23
90
4
70
58
2
0
39
1.11

Tables:   1

The End!