Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001898.1 Hibiscus syriacus cultivar Beakdansim tig00003847_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74097

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1111--1265
33
4.8
33
85
9
205
41
21
11
24
1.86
1111--1259
64
2.3
63
91
2
226
41
22
10
24
1.86
3277--3388
57
2.0
57
91
3
181
26
22
25
25
2.00
14573--14614
21
1.9
23
85
9
61
54
9
11
23
1.66
15239--15279
22
1.9
21
85
5
55
53
14
2
29
1.54
30274--30308
18
1.9
18
88
0
52
28
17
0
54
1.43
41397--41467
31
2.3
31
80
0
79
39
9
8
42
1.69
45159--45208
24
2.1
24
88
7
75
26
2
14
58
1.47
48426--48468
14
3.0
15
83
10
54
16
0
6
76
0.99
50787--50836
24
2.1
24
85
7
66
24
2
16
58
1.49
63433--63479
2
23.5
2
100
0
94
51
0
0
48
1.00
67912--67980
30
2.3
30
87
2
95
50
11
7
30
1.65
68672--68733
21
3.0
21
69
9
63
43
0
4
51
1.23
71749--71831
43
1.9
43
95
0
148
30
12
21
36
1.90

Tables:   1

The End!