Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001905.1 Hibiscus syriacus cultivar Beakdansim tig00003858_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62503

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
100--137
19
2.0
19
94
0
67
31
26
18
23
1.97
100--153
19
2.7
19
85
8
63
31
25
20
22
1.98
182--223
21
2.0
21
90
4
68
26
33
23
16
1.96
188--230
21
2.0
21
86
4
59
30
30
23
16
1.96
1411--1619
103
2.0
103
94
0
364
27
14
22
35
1.93
1635--1726
23
4.0
23
88
0
130
19
26
26
28
1.99
10937--10978
19
2.3
19
83
4
50
21
28
33
16
1.95
15058--15120
21
3.0
21
90
4
99
25
26
23
23
2.00
15057--15123
22
3.1
22
91
2
109
25
25
22
26
2.00
21646--21695
16
3.1
15
80
11
55
36
2
2
60
1.20
21631--21714
38
2.3
35
75
18
82
36
1
1
60
1.12
22271--22358
45
1.9
46
82
11
110
54
22
2
20
1.56
22303--22335
16
2.1
16
100
0
66
63
24
0
12
1.28
22342--22423
23
3.5
23
78
6
85
31
20
6
41
1.77
24253--24328
31
2.4
31
80
2
89
26
31
27
14
1.95
24206--24328
63
2.0
63
82
6
151
25
29
28
17
1.97
29375--29450
31
2.4
31
80
2
89
26
31
27
14
1.95
29328--29450
63
2.0
63
82
6
151
25
29
28
17
1.97
33355--33472
7
16.9
7
76
10
107
42
36
0
21
1.53
33860--33912
25
2.1
25
82
0
61
49
1
3
45
1.31
39813--39869
27
2.1
27
90
0
87
29
14
31
24
1.94
44084--44108
12
2.1
12
100
0
50
32
0
44
24
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47622--47666
21
2.1
21
87
0
63
31
28
24
15
1.96
49041--49068
14
2.0
14
100
0
56
28
7
28
35
1.84
49169--49485
151
2.1
149
92
3
521
28
16
20
34
1.95
49453--49497
23
2.0
23
86
0
63
22
28
26
22
1.99
52755--52799
21
2.1
21
83
0
54
28
28
24
17
1.97
54160--54187
14
2.0
14
100
0
56
28
7
28
35
1.84
54283--54586
148
2.0
149
94
0
529
28
16
20
34
1.94
54564--54608
23
2.0
23
86
0
63
22
28
26
22
1.99

Tables:   1

The End!