Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001906.1 Hibiscus syriacus cultivar Beakdansim tig00003859_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63179

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1403--1461
2
29.5
2
100
0
118
0
49
0
50
1.00
1669--1716
24
2.0
25
91
4
80
25
6
6
62
1.42
27565--27634
31
2.2
31
82
10
79
41
0
0
58
0.98
29352--29389
20
1.9
20
89
10
60
73
0
26
0
0.83
33945--33974
6
5.0
6
95
0
51
80
3
0
16
0.85
34019--34125
56
1.9
56
86
3
153
47
6
9
36
1.62
44321--44451
68
1.9
68
98
0
253
54
4
10
29
1.54
46926--47022
48
2.0
48
97
0
185
25
26
14
32
1.94
55367--55430
23
2.8
23
70
0
56
42
3
18
35
1.66
57011--57050
18
2.4
16
87
8
53
45
2
0
52
1.14
59056--59082
6
4.5
6
100
0
54
29
0
0
70
0.88

Tables:   1

The End!