Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001910.1 Hibiscus syriacus cultivar Beakdansim tig00003866_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48339

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
525--572
25
1.9
25
83
8
62
47
12
14
25
1.79
7626--7690
9
7.6
8
76
10
51
24
1
3
70
1.10
7627--7674
9
5.0
10
75
10
55
22
0
4
72
1.01
7627--7674
19
2.5
19
96
0
87
22
0
4
72
1.01
9405--9543
35
3.9
35
74
5
145
37
4
17
40
1.70
9568--9623
23
2.4
23
76
5
60
55
5
7
32
1.50
14058--14169
59
1.9
59
87
3
163
41
5
20
33
1.75
18842--18868
4
6.8
4
100
0
54
74
0
0
25
0.83
18841--18900
8
7.2
8
87
7
57
61
0
0
38
0.96
18866--18900
2
17.5
2
93
0
61
54
0
0
45
0.99
18841--18900
12
5.2
12
86
8
61
61
0
0
38
0.96
34216--34245
3
10.0
3
92
0
51
66
3
0
30
1.07
45088--45158
32
2.3
31
80
7
83
38
0
1
60
1.06
45301--45354
17
3.2
17
78
0
63
31
0
1
66
1.02
46936--47021
21
4.2
20
86
8
102
19
37
23
19
1.94
46939--47027
41
2.1
42
83
6
110
19
34
24
21
1.96
47543--47648
34
3.2
33
81
8
124
54
5
1
37
1.35

Tables:   1

The End!