Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001911.1 Hibiscus syriacus cultivar Beakdansim tig00003869_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75855

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1600--1656
27
2.1
27
90
0
87
22
19
31
26
1.98
3846--3871
3
8.7
3
100
0
52
65
0
0
34
0.93
17949--17997
5
10.2
5
85
10
59
34
2
0
63
1.06
17949--18013
14
4.4
15
84
9
73
36
3
0
60
1.13
17900--17988
24
3.7
23
72
22
58
30
4
0
65
1.13
21535--21593
12
5.0
11
79
20
50
77
3
16
1
0.98
21534--21583
27
1.9
27
88
8
77
78
4
16
2
1.00
21541--21593
12
4.2
12
82
15
63
77
3
16
1
1.01
21544--21594
27
2.0
24
88
11
75
74
3
17
3
1.12
21532--21594
25
2.5
26
83
14
80
76
4
15
3
1.09
21666--21796
69
1.9
69
91
0
217
38
23
12
25
1.91
22326--22354
12
2.4
12
100
0
58
37
34
6
20
1.80
22640--22731
32
2.8
32
86
1
130
31
10
19
38
1.86
22645--22752
32
3.4
32
85
2
110
31
12
18
37
1.89
23330--23649
106
3.0
106
88
0
444
33
22
20
23
1.97
23908--24073
87
1.9
87
92
0
278
35
16
11
36
1.85
23995--24232
100
2.4
101
82
4
284
33
17
11
37
1.86
24133--24210
37
2.1
38
85
2
104
30
15
10
43
1.80
24270--24372
36
2.8
38
86
7
167
27
22
13
36
1.92
24270--24503
36
6.6
36
72
17
141
26
20
13
39
1.89
24489--24579
39
2.4
36
89
5
128
40
23
8
27
1.84
28340--28383
22
2.0
22
82
4
54
36
20
9
34
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33565--33733
85
2.0
85
83
2
214
31
20
18
30
1.96
33751--33791
2
20.5
2
100
0
82
48
0
0
51
1.00
42226--42408
94
1.9
95
87
3
271
41
12
21
24
1.88
42862--42906
23
2.0
23
95
0
81
40
8
22
28
1.84
42886--43407
242
2.2
242
88
1
767
35
10
21
33
1.87
42886--43407
81
6.5
80
90
0
729
35
10
21
33
1.87
51905--51968
23
2.8
23
92
0
110
20
29
20
29
1.97
56875--56905
14
2.2
14
94
0
53
22
19
32
25
1.97
64888--64975
3
29.7
3
77
11
83
64
1
2
31
1.13
64905--64974
14
5.1
14
74
10
63
67
1
2
28
1.14
64903--64975
17
4.2
17
83
13
87
67
1
2
28
1.13
65345--65664
122
2.8
114
84
6
387
25
18
15
40
1.90
66840--66995
54
2.9
54
83
5
176
28
19
14
36
1.92
67865--68024
75
2.1
75
84
2
205
32
21
15
31
1.94

Tables:   1

The End!