Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001919.1 Hibiscus syriacus cultivar Beakdansim tig00003882_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41453

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2149--2193
22
2.0
22
91
0
72
51
6
4
37
1.49
6050--6267
30
7.3
30
75
7
142
58
8
13
19
1.60
6037--6263
60
3.8
60
75
7
194
57
8
14
20
1.63
6037--6251
90
2.4
90
79
2
236
57
8
13
20
1.61
7682--7995
131
2.4
131
82
2
369
26
15
32
25
1.96
8036--8103
35
1.9
35
82
11
86
33
13
22
30
1.92
8101--8257
63
2.6
61
84
7
185
46
15
14
23
1.83
8116--8334
59
3.5
61
79
9
196
44
12
15
27
1.83
8525--8589
32
2.0
33
93
3
114
32
27
13
26
1.94
9607--9660
19
2.9
19
75
8
58
0
16
5
77
0.94
9609--9658
12
4.2
12
72
27
52
0
14
6
80
0.90
9606--9674
26
2.6
27
86
6
88
0
20
7
72
1.08
17788--17852
3
21.3
3
80
9
69
60
3
3
33
1.28
25459--25497
18
2.2
18
85
0
51
46
2
7
43
1.46
25477--25566
37
2.4
37
80
12
96
44
1
2
52
1.20
25602--25645
22
2.0
22
100
0
88
40
0
4
54
1.21
28886--28925
16
2.5
16
79
0
53
37
20
22
20
1.94
31573--31606
3
11.3
3
100
0
68
67
0
0
32
0.91
32220--32281
2
31.0
2
100
0
124
50
0
0
50
1.00
33382--33412
2
15.5
2
100
0
62
51
0
0
48
1.00
35029--35437
59
6.9
59
90
0
640
34
11
22
31
1.89
39441--39495
23
2.4
23
81
0
74
32
21
23
21
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39997--40024
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!