Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000192.1 Hibiscus syriacus cultivar Beakdansim tig00000342_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57124

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18071--18103
3
11.0
3
100
0
66
66
0
0
33
0.92
18355--18680
136
2.4
136
87
0
481
33
16
19
30
1.94
21204--21244
21
1.9
22
90
5
66
29
17
2
51
1.58
24016--24056
20
2.0
20
85
0
55
36
21
12
29
1.90
26698--26740
9
4.7
9
83
13
52
69
2
9
18
1.26
38995--39034
20
2.0
20
100
0
80
30
5
15
50
1.65
40700--40769
36
1.9
36
85
0
95
28
21
17
32
1.96
44788--44855
2
34.0
2
100
0
136
50
0
0
50
1.00
45254--45295
2
21.5
2
95
4
77
52
0
0
47
1.00
48355--48462
30
3.6
30
80
9
105
61
26
10
1
1.39
48741--48809
22
3.1
22
100
0
138
31
17
4
46
1.68
49455--49489
18
2.0
18
88
5
54
65
0
0
34
0.93
50503--50563
2
30.5
2
100
0
122
49
0
0
50
1.00
50544--50663
64
1.9
64
94
0
213
35
7
11
45
1.69
56747--56802
15
3.6
15
79
9
67
42
12
12
32
1.80
56750--56800
17
3.1
17
77
11
61
43
11
9
35
1.75

Tables:   1

The End!