Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001925.1 Hibiscus syriacus cultivar Beakdansim tig00003896_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62712

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151--524
58
6.6
59
83
9
467
34
11
23
30
1.90
1428--1599
44
4.0
44
92
0
276
40
12
23
23
1.89
1428--1599
87
2.0
87
90
2
274
40
12
23
23
1.89
5993--6227
129
1.8
131
83
3
314
25
16
31
27
1.97
5993--6266
129
2.1
130
80
5
295
25
16
29
28
1.97
6275--6469
63
3.0
64
78
12
200
41
12
18
27
1.86
6402--6551
81
1.9
81
91
2
248
43
9
17
30
1.80
9916--9985
32
2.2
32
100
0
140
32
28
5
32
1.81
12473--12520
19
2.5
19
100
0
96
16
43
12
27
1.84
12504--12614
48
2.3
48
92
0
177
11
33
10
44
1.76
13555--13601
24
1.9
25
82
4
60
10
4
44
40
1.59
13613--13732
3
38.3
3
80
14
136
62
0
0
36
1.01
13622--13725
20
5.8
18
77
16
101
62
0
0
36
1.02
25497--25542
13
3.6
13
72
16
51
52
8
0
39
1.33
28673--28715
20
2.2
20
86
0
59
34
13
16
34
1.88
51240--51284
2
23.0
2
95
4
83
48
0
0
51
1.00
51606--51707
21
4.9
21
77
7
91
21
37
25
15
1.93
52060--52124
34
2.0
32
87
6
94
29
16
29
24
1.97
55072--55178
22
5.0
21
84
5
133
19
39
27
14
1.90
55071--55179
44
2.5
44
88
5
159
19
39
26
14
1.90

Tables:   1

The End!