Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001926.1 Hibiscus syriacus cultivar Beakdansim tig00003897_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70650

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4282--4342
22
3.0
20
86
11
79
77
1
19
1
0.95
4289--4342
11
5.1
11
75
6
58
75
1
20
1
0.98
7165--7203
20
2.0
20
89
0
60
15
7
20
56
1.63
10892--10972
38
2.1
38
86
0
108
24
13
39
22
1.90
17009--17050
20
2.1
20
86
0
57
47
0
7
45
1.30
17682--17747
3
21.0
3
84
6
78
37
1
1
59
1.16
17677--17757
27
3.0
28
77
12
89
41
2
1
54
1.21
19203--19235
15
2.3
15
89
5
50
42
3
0
54
1.15
25354--25432
26
3.0
26
98
0
149
69
10
15
5
1.33
25361--25459
26
3.8
26
87
1
92
74
5
16
4
1.14
25420--25469
25
2.0
26
88
4
75
76
0
22
2
0.89
25417--25473
8
7.1
8
75
13
55
78
0
19
1
0.83
25354--25457
52
2.0
51
83
12
133
71
7
16
4
1.27
29424--29474
23
2.2
23
85
0
66
27
27
25
19
1.99
29593--29628
18
2.0
18
100
0
72
33
33
22
11
1.89
29489--29973
121
4.0
121
94
0
853
36
24
13
24
1.92
29714--29749
18
2.0
18
94
0
63
33
30
22
13
1.93
29835--29870
18
2.0
18
94
0
63
36
33
19
11
1.87
33237--33291
22
2.5
22
90
0
92
36
9
14
40
1.78
34175--34517
37
9.4
36
74
2
281
30
18
13
37
1.89
34166--34517
73
4.8
73
96
1
618
31
18
13
36
1.89
34845--34889
3
14.0
3
90
9
63
35
0
2
62
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36328--36360
15
2.3
15
89
5
50
42
3
0
54
1.15
40440--40487
2
24.5
2
95
4
89
50
0
0
50
1.00
51502--51539
20
1.9
20
88
0
58
31
23
5
39
1.77
61067--61168
47
2.2
47
90
0
159
28
21
19
30
1.98
62069--62106
8
4.9
8
80
6
51
84
2
0
13
0.73
67298--67330
3
11.0
3
100
0
66
66
0
0
33
0.92
68197--68266
17
4.1
17
88
0
104
35
15
5
42
1.71
68183--68258
34
2.2
34
80
0
89
35
15
6
42
1.73

Tables:   1

The End!