Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000193.1 Hibiscus syriacus cultivar Beakdansim tig00000343_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84302

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2294--2336
19
2.4
17
88
7
59
76
0
2
20
0.89
2588--2667
42
1.9
42
82
5
99
21
15
25
38
1.92
2688--2742
19
2.9
19
84
12
69
23
21
21
32
1.98
5088--5437
54
6.5
54
87
2
465
32
18
18
31
1.95
9443--9549
30
3.5
30
89
2
160
57
0
28
13
1.36
10064--10100
17
2.2
17
95
0
65
45
29
2
21
1.65
15458--15492
18
1.9
18
94
0
61
34
14
25
25
1.94
15466--15501
18
2.0
18
88
0
54
36
11
22
30
1.89
19220--19254
18
1.9
18
94
0
61
34
14
25
25
1.94
19228--19263
18
2.0
18
88
0
54
36
11
22
30
1.89
24011--24411
200
2.0
200
98
0
766
26
18
19
34
1.95
41325--41397
31
2.4
31
97
2
139
21
20
21
35
1.96
67852--67946
44
2.1
45
90
1
147
20
7
28
44
1.78
68501--68533
16
2.1
16
100
0
66
57
24
12
6
1.57
68599--68673
10
7.7
10
69
21
61
57
21
12
9
1.62
68603--68667
16
4.1
16
95
0
121
56
23
12
7
1.61
69422--69477
14
4.3
14
82
17
75
51
25
14
8
1.70
69402--69476
24
3.1
24
90
3
107
54
21
12
12
1.69
69415--69462
10
4.4
10
78
19
51
54
22
12
10
1.68

Tables:   1

The End!