Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001932.1 Hibiscus syriacus cultivar Beakdansim tig00003910_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56555

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4061--4217
61
2.5
61
85
4
188
26
25
18
29
1.98
9555--9596
21
2.0
21
81
9
50
35
4
14
45
1.66
12726--12778
2
26.5
2
96
0
97
49
1
0
49
1.12
33497--33529
17
1.9
17
88
11
50
24
9
6
60
1.49
34065--34120
26
2.2
26
83
6
69
41
7
5
46
1.54
36171--36332
81
2.0
80
91
3
263
26
6
16
50
1.68
37329--37358
16
1.9
16
93
6
53
30
0
0
70
0.88
37333--37373
16
2.5
17
80
15
50
31
2
0
65
1.05
37331--37373
15
2.8
16
82
3
52
34
2
0
62
1.08
37656--37680
12
2.1
12
100
0
50
24
24
16
36
1.94
40716--40742
14
1.9
14
100
0
54
14
29
18
37
1.91
48189--48243
29
1.9
28
96
3
101
89
5
5
0
0.61
48189--48242
1
54.0
1
84
0
63
90
5
3
0
0.53

Tables:   1

The End!