Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000194.1 Hibiscus syriacus cultivar Beakdansim tig00000344_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74466

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7044--7084
22
2.0
21
85
9
57
19
19
17
43
1.88
9051--9228
50
3.6
49
83
4
223
48
15
12
23
1.79
18546--18571
7
3.7
7
100
0
52
57
0
26
15
1.38
26269--26311
20
2.2
20
86
0
59
34
20
13
30
1.92
30741--30812
30
2.4
30
86
2
92
29
30
20
19
1.97
31458--31608
64
2.3
65
85
6
191
28
17
19
34
1.95
34537--34585
21
2.5
20
78
18
57
38
22
2
36
1.66
41951--41990
21
1.9
21
89
0
62
50
5
12
32
1.62
44143--44191
2
24.5
2
100
0
98
48
0
0
51
1.00
44592--44620
2
14.5
2
100
0
58
48
0
0
51
1.00
44779--44839
21
2.9
21
85
9
63
32
0
22
44
1.54
44861--44938
22
3.6
22
74
3
79
21
1
29
47
1.59
46018--46064
12
3.7
12
81
15
58
46
17
19
17
1.84
48347--48386
21
1.9
21
94
0
71
30
15
7
47
1.72
48381--48479
33
3.0
33
94
1
164
32
7
15
45
1.73
48465--48519
13
4.2
13
75
13
58
34
3
12
49
1.59
48896--48951
15
3.6
15
79
9
67
32
12
12
42
1.80
48915--48948
18
1.9
18
94
5
61
38
11
11
38
1.79
55147--55212
2
33.0
2
100
0
132
50
0
0
50
1.00
56553--56577
2
12.5
2
100
0
50
52
0
0
48
1.00
56917--56984
22
3.1
22
100
0
136
47
4
17
30
1.68
57263--57370
30
3.6
29
79
9
101
1
10
26
61
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59868--59919
24
2.2
24
82
0
59
53
23
13
9
1.68
60430--60472
2
21.5
2
100
0
86
48
0
0
51
1.00
60868--60944
2
39.0
2
97
2
147
50
0
0
49
1.00
64940--65008
35
1.9
36
82
2
86
31
17
21
28
1.96
66661--66700
20
2.0
20
100
0
80
50
15
5
30
1.65

Tables:   1

The End!