Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001947.1 Hibiscus syriacus cultivar Beakdansim tig00003941_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22409

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8660--8792
65
2.0
65
89
5
205
52
10
4
32
1.56
9131--9193
2
32.0
2
96
3
119
49
0
0
50
1.00
9180--9268
46
1.9
46
97
0
169
52
13
3
30
1.56
10410--10443
3
11.3
3
93
0
59
61
2
0
35
1.11
13206--13246
16
2.6
17
81
14
52
65
0
0
34
0.93
13215--13246
17
1.9
17
93
6
57
71
0
0
28
0.86
13866--14309
228
2.0
223
92
3
746
44
7
7
40
1.62
14375--14421
21
2.3
20
86
13
69
55
10
17
17
1.69
14542--14588
20
2.4
19
89
10
76
55
10
17
17
1.69
14546--14593
20
2.6
18
84
15
62
56
10
14
18
1.66
18729--18777
19
2.6
19
93
0
80
30
2
10
57
1.43
18903--20431
192
7.9
199
94
4
2697
36
16
15
31
1.90
21891--21959
3
23.0
3
77
0
66
34
5
34
24
1.80
21879--21959
18
4.2
18
75
17
72
34
7
34
23
1.83
21876--21955
12
6.7
12
80
0
79
36
7
35
21
1.82

Tables:   1

The End!