Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001955.1 Hibiscus syriacus cultivar Beakdansim tig00003957_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52825

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
795--877
38
2.2
38
85
6
107
40
2
6
50
1.40
1221--1289
29
2.3
30
95
2
122
44
11
21
21
1.84
2345--2385
19
2.1
20
90
4
66
43
12
21
21
1.85
5387--5444
20
2.7
20
84
10
71
31
18
22
27
1.97
9393--9450
20
2.6
22
89
10
84
31
20
22
25
1.98
12768--12851
41
2.0
41
86
4
116
20
22
21
35
1.96
12944--12972
6
4.8
6
100
0
58
34
48
17
0
1.47
13083--13175
20
4.6
20
83
2
132
39
22
22
15
1.91
13083--13200
61
1.9
61
98
0
227
38
22
21
17
1.93
25164--25203
19
2.1
19
86
9
55
22
2
0
75
0.93
26556--26605
12
4.4
11
82
12
57
32
2
0
66
1.03
26556--26605
24
2.2
22
85
7
64
32
2
0
66
1.03
29230--29274
21
2.1
21
87
0
63
31
28
24
15
1.96
30967--31033
22
3.0
22
95
2
116
19
26
28
25
1.99
46479--46518
20
2.1
19
86
13
55
50
2
32
15
1.57
51412--51913
123
4.1
123
91
0
738
39
15
19
25
1.91
52043--52101
3
20.7
3
81
10
61
35
1
0
62
1.05
52042--52075
16
2.1
17
94
5
61
26
0
0
73
0.83

Tables:   1

The End!