Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001958.1 Hibiscus syriacus cultivar Beakdansim tig00003962_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49963

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
255--284
2
15.0
2
100
0
60
50
0
0
50
1.00
4423--4494
15
4.7
15
81
6
90
18
26
33
22
1.96
4411--4475
32
2.0
32
93
0
112
18
21
33
26
1.96
6429--6470
22
1.9
23
85
9
61
57
0
9
33
1.31
7909--8001
18
4.9
18
81
10
114
25
30
22
21
1.99
7908--8004
20
5.1
20
81
8
130
25
28
22
22
1.99
7908--8001
38
2.5
38
89
0
152
25
29
22
22
1.99
12394--12466
18
3.9
18
82
7
101
28
30
21
19
1.98
12393--12469
38
2.0
38
92
0
127
28
28
22
20
1.98
13791--13815
13
1.9
13
100
0
50
60
0
40
0
0.97
20447--20501
28
2.0
28
85
0
74
32
16
7
43
1.75
25837--26023
96
1.9
96
86
2
268
25
15
25
33
1.95
32121--32151
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!